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miRGen v.3
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Go to miRGen v2
Please cite:
Georgios Georgakilas, Ioannis S. Vlachos, Konstantinos Zagganas, Thanasis Vergoulis, Maria D. Paraskevopoulou, Ilias Kanellos, Panayiotis Tsanakas, Dimitris Dellis, Athanasios Fevgas, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators" Nucl. Acids Res. (2016) gkv1254
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miRNA
hsa-let-7a-1
hsa-mir-22
Clear all
Transcription factor
SP2
REST
EGR1
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Filters
Tissues & cell lines
All
SK-N-SH (Homo sapiens)
IMR90 (Homo sapiens)
HUVEC (Homo sapiens)
HepG2 (Homo sapiens)
A549 (Homo sapiens)
K562 (Homo sapiens)
ESCs (Homo sapiens)
WholeBrain (Mus musculus)
Thymus (Mus musculus)
MEL (Mus musculus)
Lung (Mus musculus)
Liver (Mus musculus)
Kidney (Mus musculus)
Heart (Mus musculus)
ESCs (Mus musculus)
Upstream
Downstream
P-value
TPM
Reset filters
miRNA name
TSS Coordinates
Tissue & cell line
DIANA Links
hsa-let-7a-1
chr9:96929488-96929489 [+]
A549 (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000060
TSS cluster
:
hsa-let-7a-1
;
hsa-let-7d
;
hsa-let-7f-1
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
SP2
4
Motif logo (click to enlarge) :
Expression in A549 (TPM) :
47.22
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-1292
chr9:96928196-96928210 [+]
Footprint name:
A549-Footprint-415809
Footprint algorithm:
Wellington
Binding site start relative to footprint:
12
Binding site end relative to footprint:
26
2
-555
chr9:96928933-96928947 [+]
Footprint name:
A549-Footprint-415819
Footprint algorithm:
Wellington
Binding site start relative to footprint:
47
Binding site end relative to footprint:
61
3
-496
chr9:96928992-96929006 [+]
Footprint name:
A549-Footprint-415820
Footprint algorithm:
Wellington
Binding site start relative to footprint:
8
Binding site end relative to footprint:
22
4
-451
chr9:96929037-96929051 [+]
Footprint name:
A549-Footprint-415821
Footprint algorithm:
Wellington
Binding site start relative to footprint:
15
Binding site end relative to footprint:
29
EGR1
5
Motif logo (click to enlarge) :
Expression in A549 (TPM) :
4.48
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-1214
chr9:96928274-96928287 [+]
Footprint name:
A549-Footprint-415810
Footprint algorithm:
Wellington
Binding site start relative to footprint:
6
Binding site end relative to footprint:
19
2
-1144
chr9:96928344-96928357 [+]
Footprint name:
A549-Footprint-415811
Footprint algorithm:
Wellington
Binding site start relative to footprint:
17
Binding site end relative to footprint:
30
3
-1108
chr9:96928380-96928393 [+]
Footprint name:
A549-Footprint-415811
Footprint algorithm:
Wellington
Binding site start relative to footprint:
53
Binding site end relative to footprint:
66
4
-994
chr9:96928494-96928507 [+]
Footprint name:
A549-Footprint-415813
Footprint algorithm:
Wellington
Binding site start relative to footprint:
72
Binding site end relative to footprint:
85
5
-571
chr9:96928917-96928930 [+]
Footprint name:
A549-Footprint-415819
Footprint algorithm:
Wellington
Binding site start relative to footprint:
31
Binding site end relative to footprint:
44
hsa-let-7a-1
chr9:96928526-96928527 [+]
ESCs (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000060
TSS cluster
:
hsa-let-7a-1
;
hsa-let-7d
;
hsa-let-7f-1
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
SP2
1
Motif logo (click to enlarge) :
Expression in ESCs (TPM) :
10.37
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-330
chr9:96928196-96928210 [+]
Footprint name:
ESCs-Footprint-817411
Footprint algorithm:
Wellington
Binding site start relative to footprint:
21
Binding site end relative to footprint:
35
EGR1
5
Motif logo (click to enlarge) :
Expression in ESCs (TPM) :
2.8
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-252
chr9:96928274-96928287 [+]
Footprint name:
ESCs-Footprint-817412
Footprint algorithm:
Wellington
Binding site start relative to footprint:
6
Binding site end relative to footprint:
19
2
-182
chr9:96928344-96928357 [+]
Footprint name:
ESCs-Footprint-817413
Footprint algorithm:
Wellington
Binding site start relative to footprint:
26
Binding site end relative to footprint:
39
3
-146
chr9:96928380-96928393 [+]
Footprint name:
ESCs-Footprint-817413
Footprint algorithm:
Wellington
Binding site start relative to footprint:
62
Binding site end relative to footprint:
75
4
-32
chr9:96928494-96928507 [+]
Footprint name:
ESCs-Footprint-817415
Footprint algorithm:
Wellington
Binding site start relative to footprint:
16
Binding site end relative to footprint:
29
5
391
chr9:96928917-96928930 [+]
Footprint name:
ESCs-Footprint-817418
Footprint algorithm:
Wellington
Binding site start relative to footprint:
44
Binding site end relative to footprint:
57
hsa-let-7a-1
chr9:96928645-96928646 [+]
HepG2 (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000060
TSS cluster
:
hsa-let-7a-1
;
hsa-let-7d
;
hsa-let-7f-1
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
REST
1
Motif logo (click to enlarge) :
Expression in HepG2 (TPM) :
2.37
Ensembl Gene IDs :
ENSG00000084093
#
Distance
Coordinates
1
-531
chr9:96928114-96928134 [+]
Footprint name:
HepG2-Footprint-292609
Footprint algorithm:
Wellington
Binding site start relative to footprint:
8
Binding site end relative to footprint:
28
SP2
3
Motif logo (click to enlarge) :
Expression in HepG2 (TPM) :
2.37
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-449
chr9:96928196-96928210 [+]
Footprint name:
HepG2-Footprint-292610
Footprint algorithm:
Wellington
Binding site start relative to footprint:
33
Binding site end relative to footprint:
47
2
347
chr9:96928992-96929006 [+]
Footprint name:
HepG2-Footprint-292622
Footprint algorithm:
Wellington
Binding site start relative to footprint:
8
Binding site end relative to footprint:
22
3
392
chr9:96929037-96929051 [+]
Footprint name:
HepG2-Footprint-292623
Footprint algorithm:
Wellington
Binding site start relative to footprint:
16
Binding site end relative to footprint:
30
EGR1
4
Motif logo (click to enlarge) :
Expression in HepG2 (TPM) :
3.24
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-301
chr9:96928344-96928357 [+]
Footprint name:
HepG2-Footprint-292612
Footprint algorithm:
Wellington
Binding site start relative to footprint:
27
Binding site end relative to footprint:
40
2
-265
chr9:96928380-96928393 [+]
Footprint name:
HepG2-Footprint-292612
Footprint algorithm:
Wellington
Binding site start relative to footprint:
63
Binding site end relative to footprint:
76
3
-151
chr9:96928494-96928507 [+]
Footprint name:
HepG2-Footprint-292614
Footprint algorithm:
Wellington
Binding site start relative to footprint:
37
Binding site end relative to footprint:
50
4
272
chr9:96928917-96928930 [+]
Footprint name:
HepG2-Footprint-292620
Footprint algorithm:
Wellington
Binding site start relative to footprint:
47
Binding site end relative to footprint:
60
hsa-let-7a-1
chr9:96929200-96929201 [+]
HUVEC (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000060
TSS cluster
:
hsa-let-7a-1
;
hsa-let-7d
;
hsa-let-7f-1
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
SP2
3
Motif logo (click to enlarge) :
Expression in HUVEC (TPM) :
4.37
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-1004
chr9:96928196-96928210 [+]
Footprint name:
HUVEC-Footprint-805084
Footprint algorithm:
Wellington
Binding site start relative to footprint:
8
Binding site end relative to footprint:
22
2
-208
chr9:96928992-96929006 [+]
Footprint name:
HUVEC-Footprint-805095
Footprint algorithm:
Wellington
Binding site start relative to footprint:
40
Binding site end relative to footprint:
54
3
-163
chr9:96929037-96929051 [+]
Footprint name:
HUVEC-Footprint-805095
Footprint algorithm:
Wellington
Binding site start relative to footprint:
85
Binding site end relative to footprint:
99
EGR1
4
Motif logo (click to enlarge) :
Expression in HUVEC (TPM) :
3.86
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-926
chr9:96928274-96928287 [+]
Footprint name:
HUVEC-Footprint-805086
Footprint algorithm:
Wellington
Binding site start relative to footprint:
6
Binding site end relative to footprint:
19
2
-856
chr9:96928344-96928357 [+]
Footprint name:
HUVEC-Footprint-805087
Footprint algorithm:
Wellington
Binding site start relative to footprint:
17
Binding site end relative to footprint:
30
3
-820
chr9:96928380-96928393 [+]
Footprint name:
HUVEC-Footprint-805087
Footprint algorithm:
Wellington
Binding site start relative to footprint:
53
Binding site end relative to footprint:
66
4
-706
chr9:96928494-96928507 [+]
Footprint name:
HUVEC-Footprint-805088
Footprint algorithm:
Wellington
Binding site start relative to footprint:
68
Binding site end relative to footprint:
81
hsa-let-7a-1
chr9:96928599-96928600 [+]
IMR90 (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000060
TSS cluster
:
hsa-let-7a-1
;
hsa-let-7d
;
hsa-let-7f-1
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
EGR1
2
Motif logo (click to enlarge) :
Expression in IMR90 (TPM) :
59.31
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-219
chr9:96928380-96928393 [+]
Footprint name:
IMR90-Footprint-315748
Footprint algorithm:
Wellington
Binding site start relative to footprint:
12
Binding site end relative to footprint:
25
2
206
chr9:96928805-96928818 [+]
Footprint name:
IMR90-Footprint-315753
Footprint algorithm:
Wellington
Binding site start relative to footprint:
6
Binding site end relative to footprint:
19
SP2
3
Motif logo (click to enlarge) :
Expression in IMR90 (TPM) :
6.57
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
334
chr9:96928933-96928947 [+]
Footprint name:
IMR90-Footprint-315756
Footprint algorithm:
Wellington
Binding site start relative to footprint:
8
Binding site end relative to footprint:
22
2
393
chr9:96928992-96929006 [+]
Footprint name:
IMR90-Footprint-315757
Footprint algorithm:
Wellington
Binding site start relative to footprint:
18
Binding site end relative to footprint:
32
3
438
chr9:96929037-96929051 [+]
Footprint name:
IMR90-Footprint-315758
Footprint algorithm:
Wellington
Binding site start relative to footprint:
5
Binding site end relative to footprint:
19
hsa-let-7a-1
chr9:96929376-96929377 [+]
K562 (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000060
TSS cluster
:
hsa-let-7a-1
;
hsa-let-7d
;
hsa-let-7f-1
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
REST
1
Motif logo (click to enlarge) :
Expression in K562 (TPM) :
1.15
Ensembl Gene IDs :
ENSG00000084093
#
Distance
Coordinates
1
-1262
chr9:96928114-96928134 [+]
Footprint name:
K562-Footprint-303781
Footprint algorithm:
Wellington
Binding site start relative to footprint:
12
Binding site end relative to footprint:
32
SP2
3
Motif logo (click to enlarge) :
Expression in K562 (TPM) :
9.79
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-1180
chr9:96928196-96928210 [+]
Footprint name:
K562-Footprint-303782
Footprint algorithm:
Wellington
Binding site start relative to footprint:
17
Binding site end relative to footprint:
31
2
-384
chr9:96928992-96929006 [+]
Footprint name:
K562-Footprint-303789
Footprint algorithm:
Wellington
Binding site start relative to footprint:
9
Binding site end relative to footprint:
23
3
-339
chr9:96929037-96929051 [+]
Footprint name:
K562-Footprint-303790
Footprint algorithm:
Wellington
Binding site start relative to footprint:
18
Binding site end relative to footprint:
32
EGR1
4
Motif logo (click to enlarge) :
Expression in K562 (TPM) :
1.15
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-1102
chr9:96928274-96928287 [+]
Footprint name:
K562-Footprint-303783
Footprint algorithm:
Wellington
Binding site start relative to footprint:
1
Binding site end relative to footprint:
14
2
-1032
chr9:96928344-96928357 [+]
Footprint name:
K562-Footprint-303785
Footprint algorithm:
Wellington
Binding site start relative to footprint:
15
Binding site end relative to footprint:
28
3
-996
chr9:96928380-96928393 [+]
Footprint name:
K562-Footprint-303785
Footprint algorithm:
Wellington
Binding site start relative to footprint:
51
Binding site end relative to footprint:
64
4
-882
chr9:96928494-96928507 [+]
Footprint name:
K562-Footprint-303786
Footprint algorithm:
Wellington
Binding site start relative to footprint:
74
Binding site end relative to footprint:
87
hsa-let-7a-1
chr9:96929483-96929484 [+]
SK-N-SH (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000060
TSS cluster
:
hsa-let-7a-1
;
hsa-let-7d
;
hsa-let-7f-1
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
SP2
3
Motif logo (click to enlarge) :
Expression in SK-N-SH (TPM) :
8.27
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-1287
chr9:96928196-96928210 [+]
Footprint name:
SK-N-SH-Footprint-316939
Footprint algorithm:
Wellington
Binding site start relative to footprint:
36
Binding site end relative to footprint:
50
2
-486
chr9:96928997-96929011 [+]
Footprint name:
SK-N-SH-Footprint-316949
Footprint algorithm:
Wellington
Binding site start relative to footprint:
3
Binding site end relative to footprint:
17
3
-446
chr9:96929037-96929051 [+]
Footprint name:
SK-N-SH-Footprint-316949
Footprint algorithm:
Wellington
Binding site start relative to footprint:
43
Binding site end relative to footprint:
57
EGR1
3
Motif logo (click to enlarge) :
Expression in SK-N-SH (TPM) :
28.17
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-1139
chr9:96928344-96928357 [+]
Footprint name:
SK-N-SH-Footprint-316941
Footprint algorithm:
Wellington
Binding site start relative to footprint:
16
Binding site end relative to footprint:
29
2
-1103
chr9:96928380-96928393 [+]
Footprint name:
SK-N-SH-Footprint-316941
Footprint algorithm:
Wellington
Binding site start relative to footprint:
52
Binding site end relative to footprint:
65
3
-989
chr9:96928494-96928507 [+]
Footprint name:
SK-N-SH-Footprint-316942
Footprint algorithm:
Wellington
Binding site start relative to footprint:
65
Binding site end relative to footprint:
78
hsa-mir-22
chr17:1618936-1618937 [-]
A549 (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000078
TSS cluster
:
hsa-mir-22
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
EGR1
2
Motif logo (click to enlarge) :
Expression in A549 (TPM) :
4.48
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-808
chr17:1618128-1618141 [-]
Footprint name:
A549-Footprint-122737
Footprint algorithm:
Wellington
Binding site start relative to footprint:
31
Binding site end relative to footprint:
44
2
1605
chr17:1620541-1620554 [-]
Footprint name:
A549-Footprint-122761
Footprint algorithm:
Wellington
Binding site start relative to footprint:
231
Binding site end relative to footprint:
244
SP2
5
Motif logo (click to enlarge) :
Expression in A549 (TPM) :
4.48
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-768
chr17:1618168-1618182 [-]
Footprint name:
A549-Footprint-122737
Footprint algorithm:
Wellington
Binding site start relative to footprint:
71
Binding site end relative to footprint:
85
2
-473
chr17:1618463-1618477 [-]
Footprint name:
A549-Footprint-122742
Footprint algorithm:
Wellington
Binding site start relative to footprint:
3
Binding site end relative to footprint:
17
3
-341
chr17:1618595-1618609 [-]
Footprint name:
A549-Footprint-122744
Footprint algorithm:
Wellington
Binding site start relative to footprint:
17
Binding site end relative to footprint:
31
4
-309
chr17:1618627-1618641 [-]
Footprint name:
A549-Footprint-122744
Footprint algorithm:
Wellington
Binding site start relative to footprint:
49
Binding site end relative to footprint:
63
5
-168
chr17:1618768-1618782 [-]
Footprint name:
A549-Footprint-122746
Footprint algorithm:
Wellington
Binding site start relative to footprint:
12
Binding site end relative to footprint:
26
REST
1
Motif logo (click to enlarge) :
Expression in A549 (TPM) :
47.22
Ensembl Gene IDs :
ENSG00000084093
#
Distance
Coordinates
1
705
chr17:1619641-1619661 [-]
Footprint name:
A549-Footprint-122752
Footprint algorithm:
Wellington
Binding site start relative to footprint:
35
Binding site end relative to footprint:
55
hsa-mir-22
chr17:1619525-1619526 [-]
ESCs (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000078
TSS cluster
:
hsa-mir-22
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
SP2
2
Motif logo (click to enlarge) :
Expression in ESCs (TPM) :
2.8
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-898
chr17:1618627-1618641 [-]
Footprint name:
ESCs-Footprint-233478
Footprint algorithm:
Wellington
Binding site start relative to footprint:
23
Binding site end relative to footprint:
37
2
-757
chr17:1618768-1618782 [-]
Footprint name:
ESCs-Footprint-233480
Footprint algorithm:
Wellington
Binding site start relative to footprint:
1
Binding site end relative to footprint:
15
REST
1
Motif logo (click to enlarge) :
Expression in ESCs (TPM) :
10.37
Ensembl Gene IDs :
ENSG00000084093
#
Distance
Coordinates
1
116
chr17:1619641-1619661 [-]
Footprint name:
ESCs-Footprint-233484
Footprint algorithm:
Wellington
Binding site start relative to footprint:
35
Binding site end relative to footprint:
55
EGR1
1
Motif logo (click to enlarge) :
Expression in ESCs (TPM) :
10.37
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
1016
chr17:1620541-1620554 [-]
Footprint name:
ESCs-Footprint-233495
Footprint algorithm:
Wellington
Binding site start relative to footprint:
16
Binding site end relative to footprint:
29
hsa-mir-22
chr17:1618914-1618915 [-]
HepG2 (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000078
TSS cluster
:
hsa-mir-22
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
EGR1
3
Motif logo (click to enlarge) :
Expression in HepG2 (TPM) :
2.37
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-786
chr17:1618128-1618141 [-]
Footprint name:
HepG2-Footprint-85860
Footprint algorithm:
Wellington
Binding site start relative to footprint:
30
Binding site end relative to footprint:
43
2
-312
chr17:1618602-1618615 [-]
Footprint name:
HepG2-Footprint-85865
Footprint algorithm:
Wellington
Binding site start relative to footprint:
5
Binding site end relative to footprint:
18
3
1627
chr17:1620541-1620554 [-]
Footprint name:
HepG2-Footprint-85885
Footprint algorithm:
Wellington
Binding site start relative to footprint:
182
Binding site end relative to footprint:
195
SP2
2
Motif logo (click to enlarge) :
Expression in HepG2 (TPM) :
2.37
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-746
chr17:1618168-1618182 [-]
Footprint name:
HepG2-Footprint-85861
Footprint algorithm:
Wellington
Binding site start relative to footprint:
4
Binding site end relative to footprint:
18
2
-451
chr17:1618463-1618477 [-]
Footprint name:
HepG2-Footprint-85864
Footprint algorithm:
Wellington
Binding site start relative to footprint:
15
Binding site end relative to footprint:
29
REST
1
Motif logo (click to enlarge) :
Expression in HepG2 (TPM) :
3.24
Ensembl Gene IDs :
ENSG00000084093
#
Distance
Coordinates
1
727
chr17:1619641-1619661 [-]
Footprint name:
HepG2-Footprint-85877
Footprint algorithm:
Wellington
Binding site start relative to footprint:
105
Binding site end relative to footprint:
125
hsa-mir-22
chr17:1619583-1619584 [-]
HUVEC (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000078
TSS cluster
:
hsa-mir-22
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
SP2
3
Motif logo (click to enlarge) :
Expression in HUVEC (TPM) :
3.86
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-988
chr17:1618595-1618609 [-]
Footprint name:
HUVEC-Footprint-227595
Footprint algorithm:
Wellington
Binding site start relative to footprint:
20
Binding site end relative to footprint:
34
2
-956
chr17:1618627-1618641 [-]
Footprint name:
HUVEC-Footprint-227596
Footprint algorithm:
Wellington
Binding site start relative to footprint:
7
Binding site end relative to footprint:
21
3
-815
chr17:1618768-1618782 [-]
Footprint name:
HUVEC-Footprint-227599
Footprint algorithm:
Wellington
Binding site start relative to footprint:
1
Binding site end relative to footprint:
15
REST
1
Motif logo (click to enlarge) :
Expression in HUVEC (TPM) :
4.37
Ensembl Gene IDs :
ENSG00000084093
#
Distance
Coordinates
1
58
chr17:1619641-1619661 [-]
Footprint name:
HUVEC-Footprint-227605
Footprint algorithm:
Wellington
Binding site start relative to footprint:
73
Binding site end relative to footprint:
93
EGR1
1
Motif logo (click to enlarge) :
Expression in HUVEC (TPM) :
4.37
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
958
chr17:1620541-1620554 [-]
Footprint name:
HUVEC-Footprint-227617
Footprint algorithm:
Wellington
Binding site start relative to footprint:
224
Binding site end relative to footprint:
237
hsa-mir-22
chr17:1619595-1619596 [-]
IMR90 (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000078
TSS cluster
:
hsa-mir-22
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
SP2
1
Motif logo (click to enlarge) :
Expression in IMR90 (TPM) :
6.17
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-968
chr17:1618627-1618641 [-]
Footprint name:
IMR90-Footprint-95798
Footprint algorithm:
Wellington
Binding site start relative to footprint:
13
Binding site end relative to footprint:
27
REST
1
Motif logo (click to enlarge) :
Expression in IMR90 (TPM) :
59.31
Ensembl Gene IDs :
ENSG00000084093
#
Distance
Coordinates
1
46
chr17:1619641-1619661 [-]
Footprint name:
IMR90-Footprint-95803
Footprint algorithm:
Wellington
Binding site start relative to footprint:
1
Binding site end relative to footprint:
21
EGR1
1
Motif logo (click to enlarge) :
Expression in IMR90 (TPM) :
59.31
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
946
chr17:1620541-1620554 [-]
Footprint name:
IMR90-Footprint-95809
Footprint algorithm:
Wellington
Binding site start relative to footprint:
22
Binding site end relative to footprint:
35
hsa-mir-22
chr17:1618561-1618562 [-]
K562 (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000078
TSS cluster
:
hsa-mir-22
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
EGR1
2
Motif logo (click to enlarge) :
Expression in K562 (TPM) :
1.15
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-426
chr17:1618135-1618148 [-]
Footprint name:
K562-Footprint-82840
Footprint algorithm:
Wellington
Binding site start relative to footprint:
4
Binding site end relative to footprint:
17
2
1980
chr17:1620541-1620554 [-]
Footprint name:
K562-Footprint-82861
Footprint algorithm:
Wellington
Binding site start relative to footprint:
36
Binding site end relative to footprint:
49
SP2
3
Motif logo (click to enlarge) :
Expression in K562 (TPM) :
1.15
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-98
chr17:1618463-1618477 [-]
Footprint name:
K562-Footprint-82843
Footprint algorithm:
Wellington
Binding site start relative to footprint:
2
Binding site end relative to footprint:
16
2
34
chr17:1618595-1618609 [-]
Footprint name:
K562-Footprint-82844
Footprint algorithm:
Wellington
Binding site start relative to footprint:
7
Binding site end relative to footprint:
21
3
66
chr17:1618627-1618641 [-]
Footprint name:
K562-Footprint-82845
Footprint algorithm:
Wellington
Binding site start relative to footprint:
3
Binding site end relative to footprint:
17
hsa-mir-22
chr17:1619063-1619064 [-]
SK-N-SH (Homo sapiens)
mT
TB
lnE
lnP
mP
MirBase ID
: MI0000078
TSS cluster
:
hsa-mir-22
[
mT
TB
lnE
lnP
mP
]
Cluster diseases :
UCSC link :
TF name
Num of binding sites
EGR1
2
Motif logo (click to enlarge) :
Expression in SK-N-SH (TPM) :
8.27
Ensembl Gene IDs :
ENSG00000120738
#
Distance
Coordinates
1
-935
chr17:1618128-1618141 [-]
Footprint name:
SK-N-SH-Footprint-89877
Footprint algorithm:
Wellington
Binding site start relative to footprint:
30
Binding site end relative to footprint:
43
2
1478
chr17:1620541-1620554 [-]
Footprint name:
SK-N-SH-Footprint-89894
Footprint algorithm:
Wellington
Binding site start relative to footprint:
1
Binding site end relative to footprint:
14
SP2
3
Motif logo (click to enlarge) :
Expression in SK-N-SH (TPM) :
8.27
Ensembl Gene IDs :
ENSG00000167182
#
Distance
Coordinates
1
-600
chr17:1618463-1618477 [-]
Footprint name:
SK-N-SH-Footprint-89878
Footprint algorithm:
Wellington
Binding site start relative to footprint:
2
Binding site end relative to footprint:
16
2
-468
chr17:1618595-1618609 [-]
Footprint name:
SK-N-SH-Footprint-89879
Footprint algorithm:
Wellington
Binding site start relative to footprint:
16
Binding site end relative to footprint:
30
3
-436
chr17:1618627-1618641 [-]
Footprint name:
SK-N-SH-Footprint-89879
Footprint algorithm:
Wellington
Binding site start relative to footprint:
48
Binding site end relative to footprint:
62
REST
1
Motif logo (click to enlarge) :
Expression in SK-N-SH (TPM) :
28.17
Ensembl Gene IDs :
ENSG00000084093
#
Distance
Coordinates
1
578
chr17:1619641-1619661 [-]
Footprint name:
SK-N-SH-Footprint-89886
Footprint algorithm:
Wellington
Binding site start relative to footprint:
110
Binding site end relative to footprint:
130
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